 Graphulo Implementation of ServerSide Sparse Matrix Multiply in the Accumulo Database [Best Student Paper Finalist],
Dylan Hutchison, Jeremy Kepner, Vijay Gadepally, Adam Fuchs,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Improving Big Data Visual Analytics with Interactive Virtual Reality [Best Student Paper Finalist],
Andrew Moran, Vijay Gadepally, Matthew Hubbell, Jeremy Kepner
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Enabling OnDemand Database Computing with MIT SuperCloud Database Management System,
Andrew Prout, Jeremy Kepner, Peter Michaleas, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Lauren Edwards, Vijay Gadepally, Matthew Hubbell, Julie Mullen, Antonio Rosa, Charles Yee, Albert Reuther,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Big Data Strategies for Data Center Infrastructure Management Using a 3D Gaming Platform,
Matthew Hubbell, Andrew Moran, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Vijay Gadepally, Peter Michaleas, Julie Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee, Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Lustre, Hadoop, Accumulo,
Jeremy Kepner, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Lauren Edwards, Vijay Gadepally, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Charles Yee, Albert Reuther,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 High Performance Computing of Gene Regulatory Networks using a MessagePassing Model,
Kimberly Glass, John Quackenbush, Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 D4M: Bringing Associative Arrays to Database Engines,
Vijay Gadepally, Jeremy Kepner, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Lauren Edwards, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Charles Yee, Albert Reuther,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 A demonstration of the BigDAWG polystore system,
A Elmore, J Duggan, M Stonebraker, M Balazinska, U Cetintemel, V Gadepally, J Heer, B Howe, J Kepner, T Kraska, S Madden, D Maier, T Mattson, S Papadopoulos, J Parkhurst, N Tatbul, M Vartak, S Zdonik,
Journal Proceedings of the VLDB Endowment  Proceedings of the 41st International Conference on Very Large Data Bases, Volume 8 Issue 12,
Aug 2015, Kohala Coast, Hawaii
 The BigDAWG Polystore System,
Jennie Duggan, Aaron Elmore, Michael Stonebraker, Magda Balazinska, Bill Howe, Jeremy Kepner, Sam Madden, David Maier, Tim Mattson, Stan Zdonik,
ACM SIGMOD Record, Volume 44 Issue 2, Jun 2015
 Big Data Advanced Database Technologies,
Vijay Gadepally, Lauren Edwards, Jeremy Kepner, Dylan Hutchison, Julie Mullen, Chansup Byun,
IEEE Boston Section Course,
AprMay 2015, Lexington, MA
 Rapid Sequence Identification of Potential Pathogens Using Techniques from Sparse Linear Algebra,
Stephanie Dodson, Darrell O. Ricke, Jeremy Kepner, Nelson Chiu, Anna Shcherbina,
IEEE HST,
Apr 2015, Waltham, MA
 Big Data Architectural Challenges in Cyber Security, Biometrics, and Disaster Response,
Jeremy Kepner,
IEEE HST,
Apr 2015, Waltham, MA
 Using D4M for rapid prototyping of analytics for Apache Accumulo,
Vijay Gadepally, Lauren Edwards, Jeremy Kepner,
Accumulo Summit,
Apr 2015, Hyattsville, MD
 Accumulo: Application Development, Table Design, and Best Practices  Forward,
O'Reilly Press,
Apr 2015
 MIT SuperCloud: a Unified System Architecture for InternetofThings,
Jeremy Kepner, William Arcand, Chansup Byun, Bill Bergeron, David Bestor, Vijay Gadepally, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
University of Massachusetts HPC Seminar,
Feb 2015, Amherst, MA
 Associative Arrays: Unified Mathematics for Spreadsheets, Databases, Matrices, and Graphs,
Jeremy Kepner, Julian Chaidez, Vijay Gadepally, Hayden Jansen,
New England Database Day (NEDB),
Jan 2015, Cambridge, MA
 Sifter: A Generalized, Efficient, and Scalable Big Data Corpus Generator,
Vijay Gadepally, Sherwin Wu, Jeremy Kepner, Sam Madden,
New England Database Day (NEDB),
Jan 2015, Cambridge, MA
 Using a Big Data Database to Identify Pathogens in Protein Data Space,
Ashley Mae Conard, Stephanie Dodson, Jeremy Kepner, Darrell Ricke,
New England Database Day (NEDB),
Jan 2015, Cambridge, MA
 Accelerating Big Bio Data Analytics with the MIT SuperCloud,
Stephanie Dodson, Darrell Ricke, Ashley Conard, Vijay Gadepally, Albert Reuther, Mayank Varia, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa,
DanaFarber Institute Center for Cancer Computational Biology Seminar Series,
Dec 2014, Boston, MA
 MIT SuperCloud: a Unified System Architecture for InternetofThings,
Jeremy Kepner, William Arcand, Chansup Byun, Bill Bergeron, David Bestor, Vijay Gadepally, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
MIT Kavli Institute,
Oct 2014, Cambridge, MA
 Addressing the challenges of big data through innovative technologies,
Vijay Gadepally, Jeremy Kepner, Albert Reuther, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Charles Yee,
Big Data Innovation Summit,
Sep 2014, Boston, MA
 Genetic Sequence Matching Using D4M Big Data Approaches,
Stephanie Dodson, Darrell O. Ricke, Jeremy Kepner,
IEEE HPEC,
Sep 2014, Waltham, MA  Best Paper Award
 Computing on Masked Data: a High Performance Method for Improving Big Data Veracity,
Jeremy Kepner, Vijay Gadepally, Pete Michaleas, Nabil Schear, Mayank Varia, Arkady Yerukhimovich, Robert K. Cunningham,
IEEE HPEC,
Sep 2014, Waltham, MA
 Achieving 100,000,000 database inserts per second using Accumulo and D4M,
Jeremy Kepner, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Vijay Gadepally, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
IEEE HPEC,
Sep 2014, Waltham, MA
 Big Data Dimensional Analysis,
Vijay Gadepally & Jeremy Kepner,
IEEE HPEC,
Sep 2014, Waltham, MA
 Accelerating Big Bio Data Analytics with the MIT SuperCloud,
Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Chuck Yee,
AstraZenca Seminar,
Aug 2014, Waltham, MA
 Computing on Masked Data,
Vijay Gadepally & Jeremy Kepner,
Cyber & Netcentric Workshop,
Jun 2014, Lexington, MA
 Addressing Big Data Challenges Through Innovative Architecture, Databases and Software,
Vijay Gadepally, Jeremy Kepner, Albert Reuther, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Charles Yee,
Accumulo Summit,
Jun 2014, College Park, MD
 Adjacency Matrices, Incidence Matrices, Database Schemas, and Associative Arrays,
Jeremy Kepner & Vijay Gadepally,
Graph Algorithm Building Blocks Workshop, IPDPS,
May 2014, Pheonix, AZ
 Addressing big data challenges through innovative architecture, databases and software,
Vijay Gadepally, Jeremy Kepner, Albert Reuther, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Charles Yee,
The Data Warehousing Institute Solution Summit,
Mar 11, 2014, Savannah, GA
 MIT SuperCloud for Supercomputing, Big Data, Databases, and Virtualized Computing,
Jeremy Kepner, Albert Reuther, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Vijay Gadepally, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Chuck Yee,
BBN Seminar Series,
Mar 2014, Cambridge, MA
 Analyzing Bio Big Data using the MIT SuperCloud,
Jeremy Kepner, Stephanie Dodson, Darrell Ricke, Vijay Gadepally, Pete Michaleas, Albert Reuther, Mayank Varia, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Chuck Yee,
Harvard Biostatistics Big Data Seminar,
Mar 3, 2014, Boston, MA
 Computing on Masked Big Data,
Jeremy Kepner, Vijay Gadepally, Pete Michaleas, Nabil Schear, Mayank Varia,
New England Database Summit,
Jan 2014, Cambridge, MA
 D4M and Accumulo,
Vijay Gadepally & Jeremy Kepner,
Advanced Database Technologies Course,
Jan 2014, Cambridge, MA
 D4M 2.0 Schema: A General Purpose High Performance Schema for the Accumulo Database,
Jeremy Kepner, Christian Anderson, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, David O'Gwynn, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
Strata Conference + Hadoop World Accumulo Workshop,
Dec 2013, New York, NY
 Advanced Analytics with D4M, Matlab, Accumulo, and Hadoop,
Jeremy Kepner, Christian Anderson, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, David O'Gwynn, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
Nov 2013, Boston Data Festival, Cambridge, MA
 LLGrid: Next Generation Computing Resources,
Jeremy Kepner, Albert Reuther, William Arcand, Bill Bergeron, David Bestor, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Chuck Yee,
MIT ARTS,
Nov, 2014, Cambridge, MA
 MIT SuperCloud,
Jeremy Kepner, Albert Reuther, William Arcand, Bill Bergeron, David Bestor, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Antonio Rosa, Chuck Yee,
Chesapeake LargeScale Analytics Conference,
October 1416, 2013, Annapolis, MD
 Creation and Implementation of D4M Algorithm for Protein Analysis,
Ashley Conard, Jeremy Kepner, Darrell Ricke, Stephanie Dodson,
Opportunities for Undergraduate Research in CS,
Oct 18, 2013, Pittsburgh, PA
 Comparing D4M Genetic Sequence Analysis with BLAST,
Stephanie Dodson, Jeremy Kepner, Darrell Ricke, Ashley Conard,
Women in Mathematics in New England,
Sep 21, 2013, Northampton, MA
 D4M 2.0 Schema: A General Purpose High Performance Schema for the Accumulo Database
[Paper]
[Presentation]
Jeremy Kepner, Christian Anderson, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, David O'Gwynn, Andrew Prout, Albert Reuther, Antonio Rosa, Charles Yee,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2013, Waltham, MA
 LLSuperCloud: Sharing HPC Systems for Diverse Rapid Prototyping
[Paper]
[Presentation]
Albert Reuther, Jeremy Kepner, William Arcand, David Bestor, Bill Bergeron, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, & Antonio Rosa,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2013, Waltham, MA
 Taming Biological Big Data with D4M
Jeremy Kepner, Darrell O. Ricke & Dylan Hutchison,
MIT Lincoln Laboratory Journal,
Fall 2013
 Green Computing is Super MIT News, July 18, 2013
 Transforming Bioinformatics Data with D4M Accumulo
Jeremy Kepner & Darrell O. Ricke,
Keynote: Applied Pharmaceutical Software Conference,
June 11, 2013, Cambridge, MA
 LLGrid: Supercomputer for Sensor Processing
Jeremy Kepner, William Arcand, Nadya Bliss, William Bergeron, David Bestor, Chansup Byun, Matthew Hubbell, Peter Michaleas, Julie Mullen, Andrew Prout, Albert Reuther, Antonio Rosa, & Charles Yee
Contemporary High Performance Computing: From Petascale toward Exascale, editor: Jeffrey Vettor, CRC Press,
April, 2013
 Massachusetts Miracle Pomona College Today, March 21, 2013
 Big Databases for Big Computations
Jeremy Kepner (organizer),
Minisymposium at SIAM Conference on Computational Science and Engineering,
March 1, 2013, Boston, MA
 Driving Big Data With Big Compute
[Paper]
[Slides]
Chansup Byun, William Arcand, David Bestor, Bill Bergeron, Matthew Hubbell, Jeremy Kepner, Andrew McCabe, Peter Michaleas, Julie Mullen, David O'Gwynn, Andrew Prout, Albert Reuther, Antonio Rosa & Charles Yee,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2012, Waltham, MA
 Large Scale Network Situational Awareness Via 3D Gaming Technology
[Paper]
[Slides]
[New Scientist Article]
[Critical Gamer Article]
Matthew Hubbell & Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2012, Waltham, MA
 Scalable Cryptographic Authentication for High Performance Computing
[Paper]
[Slides]
Andrew Prout, William Arcand, David Bestor, Chansup Byun, Bill Bergeron, Matthew Hubbell, Jeremy Kepner, Andrew McCabe, Peter Michaleas, Julie Mullen, Albert Reuther & Antonio Rosa,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2012, Waltham, MA
 HPCVMs: Virtual Machines in High Performance Computing Systems,
Albert Reuther, Peter Michaleas, Andrew Prout & Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2012, Waltham, MA
 Possible Hadoop Trajectories,
Mike Stonebraker & Jeremy Kepner, Communications of the ACM,
May 2, 2012
 The Future of Scientific Data Bases,
Mike Stonebraker, Anastasia Ailamaki, Jeremy Kepner & Alex Szalay,
International Conference on Data Engineering (ICDE), Apri 15, 2012, Arlington, Virgina
 Efficiently Engineered Computing Technology (EFFECT): Software Opportunities,
Jeremy Kepner, DARPA/ISAT workshop on:
Advancing Computer Systems without Technology Progress,
March 26, 2012, Chicago, Illinois
 Dynamic Distributed Dimensional Data Model (D4M) Database and Computation System
[Paper]
[Slides]
J. Kepner, W. Arcand, W. Bergeron, N. Bliss, R. Bond, C. Byun, G. Condon, K. Gregson, M. Hubbell, J. Kurz, A. McCabe, P. Michaleas, A. Prout, A. Reuther, A. Rosa & C. Yee,
ICASSP (International Conference on Accoustics, Speech, and Signal Processing),
Special session on Signal and Information Processing for "Big Data" (organizers: Bliss & Wolfe),
March 2530, 2012, Kyoto, Japan
 A Scalable Signal Processing Architecture for Massive Graph Analysis,
B.A. Miller, N. Arcolano, M.S. Beard, N.T. Bliss, J. Kepner, M.C. Schmidt & P.J. Wolfe,
ICASSP (International Conference on Accoustics, Speech, and Signal Processing),
Special session on Signal and Information Processing for "Big Data" (organizers: Bliss & Wolfe),
March 2530, 2012, Kyoto, Japan
 The 2011 HPC Challenge Awards,
Piotr Luszczek & Jeremy Kepner,
Supercomputing, Nov 1218, 2011, Portland, OR
 Massive Database Analysis on the Cloud with D4M,
[PowerPoint]
[PDF],
J. Kepner, W. Arcand, W. Bergeron, C. Byun, M. Hubbell, B. Landon, A. McCabe, P. Michaleas, A. Prout, T. Rosa, D. Sherrill, A. Reuther & C. Yee,
HPEC Workshop, 2011, Sep 2122, Lexington, MA
 Persistent Surveillance Supercomputing: MIT LL DHPI Year 1 Update,
J. Kepner, W. Arcand, Chansup Byun, B. Bergeron, M. Hubbell, A. McCabe, P. Michaleas, J. Mullen & A. Reuther,
HPCMP User's Group Meeting,
June 2123, 2011, Portland, OR
 Persistent Surveillance Supercomputing using the LLGrid Filesystem,
J. Kepner, C. Byun, W. Arcand, W. Bergeron, M. Hubbell, A. McCabe, P. Michaleas & A. Reuther,
HPCMP User's Group Meeting,
June 2123, 2011, Portland, OR
 Supercomputing: SaaS, IaaS, or PaaS?,
A. Reuther & J. Kepner,
HPCMP User's Group Meeting,
June 2123, 2011, Portland, OR
 Benchmarking the MITLL TXGreen System,
C. Byun, J. Kepner, A. McCabe, W. Arcand, W. Bergeron, M. Hubbell, P. Michaleas, J. Mullen, A. Reuther & A. Rosa,
HPCMP User's Group Meeting,
June 2123, 2011, Portland, OR
 3D Graph Processor,
[Abstract]
[PowerPoint]
[PDF],
W. Song, J. Kepner, H. Nguyen, J. Kramer, V. Gleyzer, J. Mann, A. Horst, L. Retherford, R. Bond, N. Bliss, E. Robinson, S. Mohindra & J. Mullen,
HPEC Workshop, 2010, Sep 1516, Lexington, MA
 Persistent Surveillance Supercomputing in a Can,
[Abstract]
[PowerPoint]
[PDF],
J. Kepner, W. Arcand, C. Byun, B. Bergeron, M. Hubbell, A. McCabe, P. Michaleas, J. Mullen & A. Reuther,
HPEC Workshop, 2010, Sep 1516, Lexington, MA
 DR&E LLGrid Portal: Interactive Supercomputing for DoD,
[Abstract]
[PowerPoint]
[PDF],
A. Reuther, W. Arcand, C. Byun, B. Bergeron, M. Hubbell, J. Kepner, A. McCabe, P. Michaleas, J. Mullen & A. Prout
HPEC Workshop, 2010, Sep 1516, Lexington, MA
 Toward MegaScale Computing with pMatlab,
[Abstract]
[PowerPoint]
[PDF],
C. Byun, J. Kepner, V. Sachdeva & K. Jordan,
HPEC Workshop, 2010, Sep 1516, Lexington, MA
 DR&E LLGrid Portal Prototype ,
J. Kepner, W. Arcand, C. Byun, B. Bergeron, M. Hubbell, A. McCabe, P. Michaleas, J. Mullen & A. Reuther,
HPCMP User's Group Meeting,
July 1417, 2010, Chicago, IL
 pMatlab on MegaCore Systems,
C. Byun, J. Kepner, A. Reuther, P. Michaleas, V. Sachdeva & K. Jordan,
HPCMP User's Group Meeting,
July 1417, 2010, Chicago, IL
 Persistent Surveillance Supercomputing: MIT LL DHPI Year 0 Update,
J. Kepner, W. Arcand, C. Byun, B. Bergeron, M. Hubbell, A. McCabe, P. Michaleas, J. Mullen & A. Reuther,
HPCMP User's Group Meeting,
July 1417, 2010, Chicago, IL
 Rapid prototyping of radar algorithms,
A. Reuther & J. Kepner,
IEEE Signal Processing Magazine, Nov 2009, Vol 26 Issue 6, pp 158162
 Parallel Matlab for Multicore and Multinode Computers J. Kepner, SIAM Press, 2009.
 Engaging Supercomputing,
J. Kepner, MIT Lincoln Laboratory Technical Seminar Series,
Invited Talk presented at:
 MIT RLE Lincoln Lab Seminar Series,
November 4, 2009, Cambridge, MA
 ECE Dept, University of Minnesota,
August, 2009, Minneapolis, MN
 Computational Research in Boston (CRiB) seminar,
J. Kepner, A. Edelman & C. Hill,
February 6, 2009, MIT, Cambridge, MA
 Multicore Programming in pMatlab using Distributed Arrays,
J. Kepner, MIT Lincoln Laboratory Technical Seminar Series,
Invited Talk presented at:
 Distinguished Lecture Series, Invited Talk:
Multicore Programming in pMatlab Using Distributed Arrays,
J. Kepner, October 15, 2009, ECE Dept, Northeastern University, Boston, MA
 DoD HPCMP User's Group, Tutorial: Parallel MATLAB for Multicore and Multinode Computers,
J. Kepner, July 15, 2009, San Diego, CA
 DoD HPCMP User's Group, BoF: Parallel and Multicore Matlab,
(organizer: J. Kepner), July 15, 2008, Seattle, WA
 Challenges of Large Applications in Distributed Environments (CLADE),
(Chairs: Y. Kim & X. Li), June 23, 2008, Boston, MA
 MIT Applied Parallel Computing (instructor: Prof. A. Edelman),
April 3 & 8, 2008, Cambridge, MA
 SIAM Parallel Processing 2008,
Minisymposium on Parallel Computing with Matlab,
(organizers P. Luszczek & J. Kepner),
March 1214, 2008, Atlanta, GA
 SC2007 Workshop: Parallel Computing with MATLAB,
(Chairs: S. Ahalt & J. Kepner), November 12, 2007, Reno, NV
 Cloud ComputingWhere ISR Data Will Go for Exploitation,
[Abstract]
[PowerPoint]
[PDF],
A. Reuther, J. Kepner, P. Michaleas & W. Smith,
HPEC Workshop, 2009, Sep 2223, Lexington, MA
 Lincoln Laboratory awarded supercomputer,
J. Kepner, Press Release, July, 2009
 Green supercomputing, economic development, and the DoD,
J. Kepner, InsideHPC, July 7, 2009
 MIT LL DHPI System Technical Update,
J. Kepner,
HPCMP User's Group Meeting,
July 15, 2009, San Diego, CA
 Computational Challenges in Graph Detection,
J. Kepner, N. Bliss & E. Robinson,
HPCMP User's Group Meeting,
July 15, 2009, San Diego, CA
 Cloud Supercomputing for Persistent Surveillance,
A. Reuther, J. Kepner, P. Michaleas & W. Smith,
HPCMP User's Group Meeting,
July 15, 2009, San Diego, CA
 PhotoMAN Photonic ManyCore Architecture Network,
J. Kepner,
Invited Talk, DARPA MTO Symposium,
March 4, 2009, San Jose, CA
 Extreme Virtual Memory,
J. Kepner, H. Kim & C. Kahn,
Patent, 2009
 HighProductivity Software Development with pMatlab,
J. Mullen, N. Bliss, R. Bond, J. Kepner, H. Kim, A. Reuther,
Computing in Science and Engineering, Vol 11 Number 1, pp 7579, JanFeb 2009
 BOF: The 2008 HPC Challenge Awards,
J. Dongarra and J. Kepner, SC2008, November 13, 2008, Reno, NV
 HighProductivity Software Development with pMatlab,
J. Mullen, N. Bliss, R. Bond, J. Kepner, H. Kim & A. Reuther,
IEEE Computing in Science and Engineering, Vol. 11, No. 1, January/February 2009
 Evaluating the Productivity of a Multicore Architecture
[Abstract]
[PowerPoint]
[PDF],
J. Kepner & N. Bliss,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 PVTOL: Designing Portability, Productivity and Performance for Multicore Architectures
[Abstract]
[PowerPoint]
[PDF],
H. Kim, N. Bliss, J. Daly, K. Eng, J. Gale, J. Geraci, R. Haney,
J. Kepner, S. Mohindra, S. Sacco & E. Rutledge,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 Language, Dialect, and Speaker Recognition Using Gaussian Mixture Models on the Cell Processor
[Abstract]
[PowerPoint]
[PDF],
N. Malyska, S. Mohindra, D. Reynolds & J. Kepner
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 Photonic ManyCore Architecture Study
[Abstract]
[PowerPoint]
[PDF],
N. Bliss, K. Asanovic, K. Bergman, L. Carloni, J. Kepner & V. Stojanovic,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 2D3D Registration of Optical and Ladar Imagery for RealTime Tracking
[Abstract]
[PowerPoint]
[PDF],
A. Mastin, J. Fisher & J. Kepner,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 MIT Lincoln Laboratory TX2500 achieves 0.5 Petabytes using pMatlabXVM,
J. Kepner, press release, September, 2008.
 Lincoln Labs: largest single problem ever run,
J. Kepner, press release, InsideHPC, Aug 22, 2008
 PVTOL: Providing Productivity, Performance and Portability to
DoD Signal Processing Applications on Multicore Processors,
Hahn Kim; Rutledge, E.; Sacco, S.; Mohindra, S.; Marzilli, M.;
Kepner, J.; Haney, R.; Daly, J.; Bliss, N.;
DoD HPCMP Users Group Conference,1417 July 2008 , Seattle, WA
 BOF: The 2007 HPC Challenge Awards,
J. Dongarra and J. Kepner, SC2007, November 13, 2007, Reno, NV
 Parallel Programming in MATLAB: Best Practices,
J. Kepner, SC2007 Workshop: Parallel Computing with MATLAB
(Chairs: S. Ahalt & J. Kepner), November 12, 2007, Reno, NV
 A HighLevel Signal Processing Library for Multicore Processors
J. Kepner, N. Bliss, R. Haney, J. Kepner, H. Kim, S. Mohindra,
S. Sacco, G. Schrader and E. Rutledge,
Invited Talk, Sep 24, University of Minnesota, Minneapolis, MN
 TX2500: An Interactive, OnDemand RapidPrototyping HPC System
[Abstract]
[PowerPoint]
[PDF],
A. Reuther, W. Arcand, T. Currie, A. Funk,
J. Kepner, M. Hubbell, A. McCabe and P. Michaleas, to appear in
HPEC Workshop, 2007, Sep 1820, Lexington, MA
 Projective Transform on Cell: A Case Study
[Abstract]
[PowerPoint]
[PDF],
S. Sacco, H. Kim, S. Mohindra, P. Boettcher,
C. Bowen, N. Bliss, G. Schrader and J. Kepner, to appear in
HPEC Workshop, 2007, Sep 1820, Lexington, MA
 PVTOL: A HighLevel Signal Processing Library for Multicore Processors
[Abstract]
[PowerPoint]
[PDF],
H. Kim, N. Bliss, R. Haney, J. Kepner, M. Marzilli, S. Mohindra,
S. Sacco, G. Schrader and E. Rutledge, to appear in
HPEC Workshop, 2007, Sep 1820, Lexington, MA
 Lincoln Lab Releases PVTOL Multicore Software Architecture,
J. Kepner, Press Release,
HPC Wire, June 29, 2007 Vol. 16, No. 26.
 MIT Lincoln Laboratory DHPI System Technical Update,
J. Kepner, W. Arcand, N. Bliss, T. Currie, M. Hubbell, J. Goodman,
H. Kim, A. McCabe, P. Michaleas, B. Miller, J. Mullin & A. Reuther,
DOD HPCMP User's Group Conference 2007,
June 1822, Pittsburgh, PA
 The Technical Challenges of Supporting Interactive HPC,
A. Reuther, J. Kepner, J. Mullen, A. McCabe, N. Bliss and H. Kim,
DOD HPCMP User's Group Conference 2007,
June 1822, Pittsburgh, PA
 Benchmarking the MIT LL HPCMP DHPI System,
A. Reuther, A. Funk, J. Kepner, A. McCabe, W. Arcand, T. Currie,
M. Hubbell and P. Michaleas,
DOD HPCMP User's Group Conference 2007,
June 1822, Pittsburgh, PA
 MIT Lincoln Laboratory Activates LLGrid,
J. Kepner, Press Release,
HPC Wire, June 15, 2007 Vol. 16, No. 24.
 LLGrid TX2500 Cluster HPC Challenge Benchmark Results,
A. Funk and J. Kepner
 A HighLevel Signal Processing Library for Multicore Processors,
S. Sacco, N. Bliss, R. Haney, J. Kepner, H. Kim, S. Mohindra,
G. Schrader and E. Rutledge,
Georgia Tech, Sony/Toshiba/IBM Workshop on
Software and Applications for the Cell/B.E. processor,
June 1819, Georgia Tech, Atlanta, GA
 Quantitative Measurements of Productivity in an HPC Environment,
J. Kepner, Invited Talk, International Conference on Software Engineering,
3rd International Workshop on Software Engineering for High
Performance Computing Applications (Chair: J. Carver), May 26, Minneapolis, MN
 pMatlab: Parallel Matlab Library for Signal Processing Applications,
N. Bliss, J. Kepner, H. Kim, A. Reuther,
Invited Talk, International Conference on Acoustics, Speech, and Signal Processing (ICASSP),
Special Session on Parallel and Distributed MATLAB Applications
in Signal and Image Processing (Chair: A. Krishnamurthy)
April 17, 2007, Honolulu, Hawaii
 Exploring the Cell with HPEC Challenge Benchmarks,
S. Sacco, J. Kepner, G. Schrader and M. Marzelli,
Invited Talk, Computational Research in Boston (CRiB) seminar,
February 2, 2007, MIT, Cambridge, MA
 Exploring the Cell with HPEC Challenge Benchmarks,
J. Kepner, S. Sacco, G. Schrader and M. Marzelli,
Invited Talk, Boston area ARChitecture (BARC 2007) 5th Annual Workshop,
January 27, 2007, Boston University, Boston, MA
 pMatlab Parallel Matlab Library,
N. Bliss and J. Kepner, International Journal of High Performance
Computing Applications: Special Issue on High Level Programming Languages and Models,
J. Kepner and H. Zima (editors), Winter 2006 (November)
 High Productivity Computing Systems and the Path Towards Usable Petascale Computing: User Productivity Challenges,
J. Kepner (editor), CT Watch, Vol 2, Number 4A, November 2006
 High Productivity Computing Systems and the Path Towards Usable Petascale Computing: System Productivity Technologies,
J. Kepner (editor), CT Watch, Vol 2, Number 4B, November 2006
 High Productivity Computing Systems and the Path Towards Usable Petascale Computing,
J. Kepner, CT Watch, Vol 2, Number 4A, November 2006
 Design and Implementation of the HPC Challenge Benchmark Suite,
P. Luszczek, J. Dongarra and J. Kepner, CT Watch, Vol 2, Number 4A, November 2006
 Analysis of Parallel Software Development using the Relative Development Time Productivity Metric,
A. Funk, V. Basili, L. Hochstein and J. Kepner, CT Watch, Vol 2, Number 4A, November 2006
 Designing Scalable Synthetic Compact Applications for Benchmarking High Productivity Computing Systems,
D. Bader, K. Madduri, J. Gilbert, V. Shah, J.y Kepner, T. Meuse and A. Krishnamurthy,
CT Watch, Vol 2, Number 4A, November 2006
 A Systemwide Productivity Figure of Merit,
D. Murphy, T. Nash, L. Votta and J. Kepner,
CT Watch, Vol 2, Number 4A, November 2006
 Panel: Is 99% Utilization of a Supercomputer a Good Thing?,
A. Snavely and J. Kepner,
Supercomputing 2006, November 16, Tampa, FL
 Panel: High Productivity Computing and Usable Petascale Systems,
J. Kepner (Chair), R. Lucas, M. Elnozahy, J. Mitchell and S. Scott
Supercomputing 2006, November 15, Tampa, FL
 10 HPC Innovations with Parallel Matlab,
J. Kepner, N. Bliss, H. Kim, A. McCabe and A. Reuther,
Presented at Scatter/Gather (Chair: Ahalt)
Supercomputing 2006, November 14, Tampa, FL
 HPC Challenge Award BoF,
J. Dongarra and J. Kepner,
Supercomputing 2006, November 14, Tampa, FL
 The HPC Challenge (HPCC) Benchmark Suite Tutorial,
P. Luszczek, D. Bailey, J. Dongarra, J. Kepner, R. Lucas, R. Rabenseifner, and D. Takahashi
Supercomputing 2006, November 12, Tampa, FL
 Productive Petascale Computing,
Interview with J. Kepner,
HPC Wire, November 15, 2006 Vol. 13, No. 3
 Parallel OutOfCore Programming in Matlab Using the PGAS Model,
H. Kim and J. Kepner, presented at
The Second Conference on Partitioned Global Address Space Programming Models,
October 34, 2006, Washington DC
 HPC Challenge
[PowerPoint]
[PDF],
J. Kepner,
Invited Talk, HPEC Workshop, 2006, Sep 1921, Lexington, MA
 The HPEC Challenge Benchmark Suite
[Abstract]
[PowerPoint]
[PDF],
R. Haney, T. Meuse and J. Kepner,
HPEC Workshop, 2006, Sep 1921, Lexington, MA
 HPEC Challenge SAR Benchmark pMatlab Implementation and Performance
[Abstract]
[PowerPoint]
[PDF],
J. Mullen, T. Meuse and J. Kepner,
HPEC Workshop, 2006, Sep 1921, Lexington, MA
 Exploring the Cell with HPEC Challenge Benchmarks
[Abstract]
[PowerPoint]
[PDF],
S. Sacco, J. Kepner, G. Schrader and M. Marzelli,
HPEC Workshop, 2006, Sep 1921, Lexington, MA
 Parallel VSIPL++ Standard Ratified, Code Available
Press Release, J. Kepner,
HPC Wire, June 23, 2006, Vol 15, Issue 25
 DARPA High Productivity Computer Systems Program,
J. Kepner,
Invited Talk, National Center for Atmospheric Research,
July 5, 2006, Boulder, CO
 A Petascale Emulation and Interactive Algorithm Development System,
J. Kepner,
DOD HPCMP User's Group Conference 2006,
June 2629, Denver, CO
 High Performance Signal Processing Using Next Generation
MultiCore Processors and Standard APIs,
J. Kepner and G. Schrader,
DOD HPCMP User's Group Conference 2006,
June 2629, Denver, CO
 Interactive Grid Computing at Lincoln Laboratory,
N. Bliss, R. Bond, H. Kim, A. Reuther, and J. Kepner,
Lincoln Laboratory Journal, 2006, Volume 16, Number 1
 DARPA High Productivity Computer Systems Program
and the Path Towards Usable Petascale Computing,
J. Kepner,
Invited Talk, Computational Research in Boston (CRiB) Seminar, MIT,
May, 3, 2006, Cambridge, MA
 DARPA High Productivity Computer Systems Program
and the Path Towards Usable Petascale Computing,
J. Kepner,
Invited Talk, Applied Parallel Computing Course, MIT,
April, 24, 2006, Cambridge, MA
 DARPA High Productivity Computer Systems Program,
J. Kepner,
Invited Talk, Computer Science Department, University of California,
January 9, 2006, San Diego, CA
 pMatlabXVM: Parallel Matlab for Extreme Virtual Memory,
H. Kim, C. Kahn, and J. Kepner,
OSC Parallel Matlab Workshop,
Supercomputing 2005, November 15, Seattle, WA
 HPC Challenge Award BoF,
J. Dongarra and J. Kepner,
Supercomputing 2005, November 15, Seattle, WA
 High Productivity Computing Systems (HPCS) workshop,
J. Kepner (organizer),
Supercomputing 2005, November 14, Seattle, WA
 Tutorial: Parallel and Distributed Computing with MATLAB,
L. Dean, S. GradFreilich, J. Kepner, and A. Reuther,
Supercomputing 2005, November 13, Seattle, WA
 DARPA High Productivity Computer Systems Program,
J. Kepner,
Invited Talk, Computer Science Department, Univeristy of Massachusetts,
October 25, 2005, Amherst, MA
 pMatlabXVM: Parallel Matlab for Extreme Virtual Memory,
C. Kahn, J. Kepner and H. Kim,
Invited Talk, Computer Science Department, Amherst College,
October 24, 2005, Amherst, MA
 Press Release: MIT Lincoln Researchers Release pMatlab
J. Kepner, N. Travinin, A. Reuther and H. Kim,
HPC Wire, October 14, 2005, Vol. 14, No. 42
 Parallel OutofCore Matlab for Extreme Virtual Memory,
H. Kim, C. Kahn and J. Kepner,
IEEE Conference on Cluster Computing (Clusters 2005),
September 2729, Boston, MA
 Automatic Parallelization with pMapper,
N. Travinin, H. Hoffmann, R. Bond, H. Chan, J. Kepner and E. Wong,
IEEE Conference on Cluster Computing (Clusters 2005),
September 2729, Boston, MA
 Enabling Interactive, OnDemand High Performance Computing,
A. Reuther, T. Currie, J. Kepner, H. Kim, A. McCabe,
M. Moore and N. Travinin,
IEEE Conference on Cluster Computing (Clusters 2005),
September 2729, Boston, MA
 The HPEC Challenge Benchmark Suite
Ryan Haney, Theresa Meuse, Jeremy Kepner and James Lebak,
HPEC Workshop, 2005, Sep 2022, Lexington, MA
 A Relative Development Time Productivity Metric for HPC Systems
[Abstract]
[Slides],
A. Funk, J. Kepner, L. Hochstein, and V. Basili,
HPEC Workshop, 2005, Sep 2022, Lexington, MA
 pMapper: Automated Mapping of Parallel Matlab Codes
[Abstract]
[Slides],
N. Travinin, H. Hoffmann, R. Bond, H. Chan, J. Kepner and E. Wong,
HPEC Workshop, 2005, Sep 2022, Lexington, MA
 Advanced Hardware and Software Technologies for Ultralong FFTs
[Abstract]
[Slides],
H. Kim, J. Kepner, M. Vai and C. Kahn,
HPEC Workshop, 2005, Sep 2022, Lexington, MA
 pMatlab,
J. Kepner, A. Reuther, H. Kim, N. Travinin,
Invited talk, PGAS Programming Models Conference,
Army High Performance Computing Research Center (AHPCRC),
2005, Sep 13, Minneapolis, MN
 Press Release: VSIPL Standard Gains Wide Acceptance and
VSIPL++ Standard Ratified
J. Kepner
HPC Wire, August 19, 2005, Vol. 14, No. 33
 Parallel OutofCore Matlab for Extreme Virtual Memory,
H. Kim, C. Kahn and J. Kepner,
Proceedings of the DOD HPCMP User's Group Conference 2005,
IEEE Computer Society, June 28, Nashville, TN
 pMapper: Automated Mapping of Parallel Matlab Codes,
N. Travinin, H. Hoffmann, R. Bond, H. Chan, J. Kepner and E. Wong,
Proceedings of the DOD HPCMP User's Group Conference 2005,
IEEE Computer Society, June 28, Nashville, TN
 Technology Requirements for Supporting OnDemand Interactive Grid Commputing,
A. Reuther, T. Currie, J. Kepner, H. Kim, A. McCabe,
M. Moore and N. Travinin,
Proceedings of the DOD HPCMP User's Group Conference 2005,
IEEE Computer Society, June 29, Nashville, TN
 HPC Challenge Competition Announced
J. Donggarra and J. Kepner,
HPC Wire, June 2, 2005, Vol. 14, No. 22
 Parallel Programming in Matlab Tutorial,
J. Kepner, A. Reuther, and H. Kim,
Invited talk, Minnesota Supercomputing Institute,
2005, June 1, Minneapolis, MN
 DARPA High Productivity Computing Systems (HPCS) Overview,
J. Kepner, D. Koester and R. Lucas
Invited talk, Army High Performance Computing Research Center (AHPCRC),
2005, May 27, Minneapolis, MN
 Parallel Matlab: Current Achievements and Future Challenges
J. Kepner, A. Reuther, H. Kim, N. Travinin,
Invited talk, Army High Performance Computing Research Center (AHPCRC),
2005, May 27, Minneapolis, MN
 Application of a Development Time Productivity Metric to
Parallel Software Development,
A. Funk, V. Basili, L. Hochstein, and J. Kepner,
Second International Workshop on Software Engineering for
High Performance Computing System Applications at the
27th International Conference on Software Engineering,
May 15, St. Louis, MO
 Panel: The Future of HighEnd Computing: Standing on One Another's Feet,
D. Reed (moderator), R. Lucas, C. Johnson, J. Kepner and R. Pennington,
International Parallel and Distibuted Processing Symposium,
April 4, Boulder, CO
 Parallel VSIPL++: An Open Standard Software Library for HighPerformance Parallel Signal Processing,
with J. Lebak, H. Hoffmann and E. Rutledge,
Proceedings of the IEEE: Special Issue on Program
Generalization, Optimization, and Platform Adaptation,
J. Moura (editor), Vol. 93, No. 2, 2005, pp. 313330
 pMatlab: High Productivity, High Performance Scientific Computing,
N. Travinin, R. Bond, J. Kepner and H. Kim,
2005 SIAM Conference on Computational Science and Engineering,
February 12, Orlando, FL
 High Productivity Computing Systems (HPCS) workshop,
J. Kepner (organizer), Supercomputing 2004,
November 8, Pittsburgh, PA
 DARPA's HPCS Program to Redefine Performance Measurements
Interview with J. Kepner,
HPC Wire, Nov 5, 2004, Vol. 13, No. 44
 Parallel Matlab: Current Achievements and Future Challenges
J. Kepner, A. Reuther, H. Kim, N. Travinin,
Ohio Supercomputing Center MiniWorkshop on Parallel Matlab,
Supercomputing 2004, November 8, Pittsburgh, PA
 pMapper: Automated Mapping of Parallel Matlab Codes,
N. Travinin, H. Hoffmann, R. Bond, H. Chan, J. Kepner and E. Wong,
Ohio Supercomputing Center MiniWorkshop on Parallel Matlab,
Supercomputing 2004, November 8, Pittsburgh, PA
 HPC Productivity: An Overarching View,
J. Kepner, International Journal of High Performance
Computing Applications: Special Issue on HPC Productivity
J. Kepner (editor), Volume 18, Number 4, Winter 2004 (November)
 HPC Productivity Model Synthesis,
J. Kepner, International Journal of High Performance
Computing Applications: Special Issue on HPC Productivity
J. Kepner (editor), Volume 18, Number 4, Winter 2004 (November)
 pMatlab Takes the HPCchallenge
[Abstract]
[PowerPoint]
[PDF],
R. Haney, A. Funk, J. Kepner,
H. Kim, C. Rader, A. Reuther, N. Travinin,
High Perfomance Embedded Computing (HPEC) workshop,
Lexington, MA 2830 September 2004
 Deployment of SAR and GMTI Signal Processing on a Boeing 707
Aircraft using pMatlab and a Bladed Linux Cluster
[Abstract]
[PowerPoint]
[PDF],
J. Kepner, T. Currie, H. Kim, A. McCabe, B. Mathew, M. Moore,
D. Rabinkin, A. Reuther, A. Rhoades, N. Travinin, and L. Tella,
High Perfomance Embedded Computing (HPEC) workshop,
Lexington, MA 2830 September 2004
 LLgrid: Enabling OnDemand Grid Computing with gridMatlab and pMtalab
[Abstract]
[PowerPoint]
[PDF],
A. Reuther, T. Currie, J. Kepner, H. Kim, A. McCabe,
M. Moore and N. Travinin,
High Perfomance Embedded Computing (HPEC) workshop,
Lexington, MA 2830 September 2004
 On Demand Grid Computing with Grid Matlab and pMatlab,
A. Reuther, T. Currie, J. Kepner, H. Kim, A. McCabe,
M. Moore and N. Travinin,
IEEE International Conference on Cluster Computing,
San Diego, CA 2023 September 2004
 HPCS Productivity Overview,
J. Kepner, Invited Talk,
DOD HPCMP User's Group Conference 2004, June 8, Williamsburg, VA
 On Demand Grid Computing with Grid Matlab and pMatlab,
A. Reuther, T. Currie, J. Kepner, H. Kim, A. McCabe,
M. Moore and N. Travinin
DOD HPCMP User's Group Conference 2004, June 8, Williamsburg, VA
 Press Release: MIT Lincoln Lab, Ohio Researchers Deploy MatlabMPI Solution
HPC Wire, April 16, 2004, Vol. 13, No. 15
 Software Technologies for HighPerformance Parallel Signal Processing,
and J. Lebak, Lincoln Laboratory Journal,
Volume 15, Number 1, March, 2004.
 MatlabMPI,
J. Kepner and S. Ahalt, submitted to the Journal of Parallel
and Distributed Computing (JPDC), 2004, accepted
 HPC Productivity
panel at Supercoputing 2003
with Thomas Sterling,
Marc Snir, Ken Kennedy, Bob Numrich, Larry Votta,
and David Kuck,
November 21, 2003, Phoenix, AZ
 Parallel Matlab: The Next Generation
[Abstract]
[PowerPoint]
[PDF],
J. Kepner and N. Travinin,
7th High Performance Embedded Computing workshop (HPEC 2003),
September 2325, 2003, MIT Lincoln Laboratory, Lexington, MA
 High Performance Embedded Computing Software Initiative (HPECSI)
[Abstract]
[PowerPoint]
[PDF],
J. Kepner,
7th High Performance Embedded Computing workshop (HPEC 2003),
September 2325, 2003, MIT Lincoln Laboratory, Lexington, MA
 HPCS Application Analysis and Assessment
[Abstract]
[PowerPoint]
[PDF],
J. Kepner and D. Koester,
7th High Performance Embedded Computing workshop (HPEC 2003),
September 2325, 2003, MIT Lincoln Laboratory, Lexington, MA
 Parallel Image Processing with MatlabMPI,
J. Kepner and S. Ahalt,
DOD HPCMP User's Group Conference 2003, June 12, Bellevue, WA
 High Performance Embedded Computing Software Initiative,
J. Kepner, DOD HPCMP User's Group Conference 2003, June 10, Bellevue, WA
 Parallel Programing with MatlabMPI,
J. Kepner, presented at the Princeton University PICSIE Seminar, May 8, 2003, Princeton, NJ
 High Performance Embedded Computing Software Initiative (HPECSI),
J. Kepner, GOMACTECH, 13 March 2003, Tampa, FL,
 DoD Sensor Processing:Applications and Supporting Software Technology,
J. Kepner, Tutorial at Supercomputing 2001,
November 17, 2002, Baltimore, MD
 300x Matlab
[Abstract]
[PowerPoint]
[PDF],
J. Kepner, 6th High Performance Embedded Computing workshop (HPEC 2002),
September 2527, 2002, MIT Lincoln Laboratory, Lexington, MA
 Parallel Programing with MatlabMPI,
J. Kepner, 2002 MHPCC Application Briefs
 Press Release: Researchers Achieve 300x Speedup On HPCMP Supercomputer ,
HPC Wire, July 19, 2002, Vol. 11, No. 28
 300x Faster Matlab with MatlabMPI,
J. Kepner and S. Ahalt, submitted to Supercomputing 2002
 Parallel Computation Techniques for RealTime Stream Processing,
J. Kepner, MIT Course SMA 5505/6.338J/18.337J Applied Parallel Computing,
10 April 2002, MIT Math Department, Cambridge, MA
 Programming Parallel Computers for RealTime Stream Processing, J. Kepner,
presented at:
 Dept. of Computer Science,
April, 2004, Amherst College, Amherst, MA
 Dept. of Electrical and Computer Enginneering,
May 13, 2003, WPI, Waltham, MA
 Dept. of Electrical and Computer Enginneering,
April 24, 2002, University of Rhode Island, Kingston, RI;
 Dept. of Astrophysics,
March 28, 2002, Princeton University, Princeton, NJ;
 Department of Physics,
November 14, 2001, U.S. Air Force Academy, Boulder, CO
 National Center for Atmospheric Research (NCAR),
November 11, 2001, Boulder, CO
 Department of Computer Science,
September 28, 2001, Williams College, Williamstown, MA
 Center for Subsurface Imaging and Sensing Systems,
January 11, 2001, Northeastern University, Boston, MA
 LCS Computer Architectures group,
December 17, 2000, MIT, Cambridge, MA
 Computational Research in Princeton (CRP) series,
November 30, 2000, Princeton University, Princeton, NJ;
 High Performance Embedded Computing Software Initiative (HPECSI),
J. Kepner, GOMAC, 13 March 2002, Monterey, CA,
 A MultiThreaded Fast Convolver for Dynamically Parallel Image Processing,
J. Kepner, 2002 accepted by the Journal of Parallel and Distributed Computing
 Supercomputing in a Shoebox Q/A,
HPC Wire, November 15, 2001
 Supercomputing in a Shoebox: the convergence of High Peformance
Computing (HPC) and High Performance Embedded Computing (HPEC),
with Jack Dongarra, Charles Holland, Craig Lund, Charles Seitz,
Tony Skjellum and Tom Sterling, panel at Supercoputing 2001,
November 13, 2001, Denver, CO
 PVL An Object Oriented Software Library for Parallel Signal Processing,
with E. Rutledge, to be presented at Cluster 2001,
October 9, 2001, Newport Beach, CA
 Parallel Programing with MatlabMPI,
J. Kepner, 5th High Performance Embedded Computing workshop (HPEC 2001),
September 2527, 2001, MIT Lincoln Laboratory, Lexington, MA
 S3P: Automatic, Optimized, Mapping of Signal Processing Applications
to Parallel Architectures,
with H. Hoffman & R. Bond, to be presented at the fifith High Performance Embedded Computing Workshop (HPEC 2001),
September 2527, 2001, MIT Lincoln Laboratory, Lexington, MA
 Defining Future High Performance Embedded Computing Software Standards,
J. Kepner, presented at the DoD HPCMO Signal/Image Processing
Forum (SIP 2001) in Biloxi, MS on 1516 May 2001
 Software Fault Recovery for RealTime Signal Processing
on Massivley Parallel Computers,
with J. Lebak and H. Hoffmann,
presented at the Tenth SIAM Conference on Parallel Processing
for Scientific Computing, March 1214, Portsmouth, VA
 Integration of VSIPL and OpenMP into a Parallel Image Processing Environment,
J. Kepner, proceedings of the the fourth High Performance Embedded Computing Workshop (HPEC 2000),
September 2022, 2000, MIT Lincoln Laboratory, Lexington, MA
 High Speed Interconnects and Parallel Software Libraries:
Enabling Technologies for the NVO,
J. Kepner and J. McMahon,
presented at CalTech, June 14, 2000,
Virtual Observatories of the Future, ASP Conference Proceedings,
Vol. 225. Edited by Robert J. Brunner, S. George Djorgovski, and
Alex S. Szalay. San Francisco: Astronomical Society of the Pacific,
ISBN: 1583810579, p.297
 Enabling Technologies for the National Virtual Observatory,
Jeremy Kepner and Janice McMahon,
presented at the Center for Astrophysics, Harvard University,
11 May 2000
 VLSI Photonics Interconnects: a Systems Perspective,
Janice McMahon and Jeremy Kepner,
invitted talk presented at
Interconnections within HighSpeed Digital Systems (IHSDS)
2124 May 2000 Santa Fe, NM
 IEEE White Paper on Cluster Computing
with Dan Katz, edited by M. Baker,
Journal of Parallel and Distributed Computing, Vol 15, No 2, Summer 2001
 The Vector, Signal, and Image Processing Library
(VSIPL) Standard for High Performance
Computing: Interface and Product Status of v1.0,
with J. Lebak, R. Janka and M. Richards,
Presented at Supercomputing 99 (SC99)
November 1319, 1999, Portland, Oregon
 Interfacing Interpreted and Compiled
Languages to Support Applications on a
Massively Parallel Network of Workstations (MPNOW),
J. Kepner, M. Gokhale, R. Minnich, A. Marks & J. DeGood,
Cluster Computing 2000, Vol 3, #1, 66
 Rapid Signal Processing Software Development via Interpreted VSIPL,
J. Kepner
Presented at the High Performance Embedded Computing Workshop (HPEC99),
September 2224, 1999, MIT Lincoln Laboratory, Lexington, MA
 Interfacing Interpreted and Compiled Languages for Computing
on a Massively Parallel Network of Workstations (MPNOW),
J. Kepner, M. Gokhale, R. Minnich, A. Marks & J. DeGood,
Presented at the High Performance Embedded Computing Workshop (HPEC98),
September 2324, 1998, MIT Lincoln Laboratory, Lexington, MA
 BugDB: the worlds first dynamic web site?,
J. Kepner and D. Beaudry, September 1993,
VI Corp (aka DV Corp aka GE Intelligent Platforms DataViews),
Northampton, MA

 Algebraic Conditions for Generating Accurate Adjacency Arrays,
Karia Dibert, Hayden Jansen, Jeremy Kepner,
IEEE MIT Undergraduate Research Technology Conference,
Nov 2015
 Parallel Vectorized Algebraic AES in MATLAB for Rapid Prototyping of Encrypted Sensor Processing Algorithms and Database Analytics,
Jeremy Kepner, Vijay Gadepally, Braden Hancock, Peter Michaleas, Elizabeth Michel, Mayank Varia,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Using a Power Law Distribution to Describe Big Data,
Vijay Gadepally, Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 2015, Waltham, MA
 Graphulo: Graph Analytics in GraphBLAS,
Vijay Gadepally, Dylan Hutchison, Jeremy Kepner,
GraphEx Workshop,
Jul 2015, Dedham, MA
 Building Blocks for Graph Algorithms in the Language of Linear Algebra,
John R. Gilbert, David Bader, Aydın Buluc, Jeremy Kepner, Tim Mattson, Henning Meyerhenke,
CIMI Workshop on Innovative Clustering Methods,
Jul 2015, Toulouse, France
 Graphs, Matrices, and the GraphBLAS: Seven Good Reasons,
Jeremy Kepner, David Bade, Aydın Buluc, John Gilbert, Timothy Mattson, Henning Meyerhenke,
International Conference on Computational Science,
Jun 2015, Reykavik, Iceland
 Percolation Model of Insider Threats to Assess the Optimum Number of Rules,
Jeremy Kepner, Vijay Gadepally, Pete Michaleas,
Cyber & Netcentric Workshop,
Jun 2015, Lexington, MA
 Graphulo: Linear Algebra Graph Kernels for NoSQL Databases,
Vijay Gadepally, Jake Bolewski, Dan Hook, Dylan Hutchinson, Jeremy Kepner, Ben Miller,
IPDPS Graph Algorithms Building Blocks,
Apr 2015, Hyderabad, India
 Percolation Model of Insider Threats to Assess the Optimum Number of Rules,
Jeremy Kepner, Vijay Gadepally, Pete Michaleas,
MIT Sloan School,
Apr 2015, Lexington, MA
 Graphs, Matrices, and the GraphBLAS: Seven Good Reasons,
Jeremy Kepner, David Bade, Aydın Buluc, John Gilbert, Timothy Mattson, Henning Meyerhenke,
International Conference on Computational Science,
Jun 2015, Reykjavik, Iceland
 The Graph BLAS: building blocks for graph algorithms in the language of linear algebra,
Aydın Buluç, David Bader, John Gilbert, Joseph Gonzalez, Jeremy Kepner, Tim Mattson,
Highperformance Graph Algorithms and Applications in Computational Science,
Nov 2014, Schloss Dagstuhl
 The GraphBLAS Standard Effort,
Jeremy Kepner, David Bader, Aydin Buluc, John Gilbert, Joseph Gonzalez, Tim Mattson,
GraphEx Workshop,
Aug 2014, Dedham, MA
 The Graph BLAS effort and its implications for Exascale,
David Bader, Aydin Buluc, John Gilbert, Joseph Gonzalez, Jeremy Kepner, Tim Mattson,
SIAM workshop on Exascale Applied Mathematics Challenges and Opportunities,
Jul 2014, Chicago, IL
 The Abstract Algebra of Big Data and Associative Arrays,
Jeremy Kepner & Julian Chaidez,
SIAM Meeting on Discrete Math,
Jun 2014, Minneapolis, MN
 The Abstract Algebra of Big Data,
Jeremy Kepner & Julian Chaidez,
Union College Mathematics Conference, Oct 2013, Schenectady, NY
 Standards for Graph Algorithm Primitives
[Paper]
Tim Mattson (Intel Corporation), David Bader (Georgia Institute of Technology), Jon Berry (Sandia National Laboratory), Aydin Buluc (Lawrence Berkeley National Laboratory), Jack Dongarra (University of Tennessee), Christos Faloutsos (Carnegie Melon University), John Feo (Pacific Northwest National Laboratory), John Gilbert (University of California at Santa Barbara), Joseph Gonzalez (University of California at Berkeley), Bruce Hendrickson (Sandia National Laboratory), Jeremy Kepner (Massachusetts Institute of Technology), Charles Leiserson (Massachusetts Institute of Technology), Andrew Lumsdaine (Indiana University), David Padua (University of Illinois at UrbanaChampaign), Stephen Poole (Oak Ridge National Laboratory), Steve Reinhardt (Cray Corporation), Mike Stonebraker (Massachusetts Institute of Technology), Steve Wallach (Convey Corporation), Andrew Yoo (Lawrence Livermore National Laboratory),
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2013, Waltham, MA
 Novel Algebras for Advanced Analytics in Julia
[Paper]
Viral B. Shah, Alan Edelman, Stefan Karpinski, Jeff Bezanson, Jeremy Kepner,
IEEE High Performance Extreme Computing (HPEC) conference,
Sep 1012, 2013, Waltham, MA
 The Role of Linear Algebra in the Computer Science Curriculum,
Jeremy Kepner (MIT)[chair], Tim Davis (University of Florida), James Demmel (UC Berkeley),
Alan Edelman (MIT), Howard Elman (University of Maryland), John Gilbert (UC Santa Barbara),
Michael Heath (University of Illinois), Dianne O'Leary (University of Maryland), Michael Overton (NYU),
Yousef Saad (University of Minnesota), Ahmed Sameh (Purdue), Michael Stonebraker (MIT), Gilbert Strang (MIT),
Robert van de Geijn (University of Texas), Charles Van Loan (Cornell), Margaret Wright (NYU),
SIAM News, May 1, 2013
 The Role of Linear Algebra in the Computer Science Curriculum,
Jeremy Kepner (MIT)[chair], Tim Davis (University of Florida), James Demmel (UC Berkeley),
Alan Edelman (MIT), Howard Elman (University of Maryland), John Gilbert (UC Santa Barbara),
Michael Heath (University of Illinois), Dianne O'Leary (University of Maryland), Michael Overton (NYU),
Yousef Saad (University of Minnesota), Ahmed Sameh (Purdue), Michael Stonebraker (MIT), Gilbert Strang (MIT),
Robert van de Geijn (University of Texas), Charles Van Loan (Cornell), Margaret Wright (NYU)
Subbmited to 2013 ACM/IEEECS Computer Science Curricula Joint Task Force
 Secure Verifiable Queries: Pedigree Preserving Analytics via Associative Array Algebra,
Jeremy Kepner,
MIT Lincoln Laboratory Cyber Networking Workshop,
June 25, 2013, Lexington, MA
 Dynamic Distributed Dimensional Data Model (D4M),
Jeremy Kepner,
MIT Lincoln Laboratory Advanced Research and Technology Symposium (ARTS),
May 5, 2013, Cambridge, MA
 Dynamic Distributed Dimensional Data Model (D4M) R & D 100 Nomination,
Jeremy Kepner,
R & D Magazine
March 15, 2013, Rockaway, NJ
 Graphs, Sparse Matrices, SciDB,
Scott Sawyer & Jeremy Kepner,
Intel Science & Technology Center for Big Data, Annual Meeting, Jan 28, Santa Clara, CA
 Large Data Analysis using the Dynamic Distributed Dimensional Data Model (D4M),
Jeremy Kepner & Christian Anderson,
SIAM Conference on Computational Science and Engineering,
March 1, 2013, Boston, MA
 Transforming Big Data with D4M,
[Slides],
[Video],
New England Database Summit &
MIT CRIBB Seminar,
February 1, 2013, Cambridge, MA
 Graphs, Sparse Matrices, SciDB,
Scott Sawyer & Jeremy Kepner,
Intel Science & Technology Center for Big Data, Annual Meeting, Jan 28, Santa Clara, CA
 Signal Processing on Databases,
Jeremy Kepner, Course given at MIT Lincoln Laboratory, Lexington, MA
 Lecture 0: Introduction,
October 3, 2013
 Lecture 1: Using Associative Arrays,
October 10, 2013
 Lecture 2: Group Theory: Spreadsheets, Big Tables, and the Algebra of Associative Arrays
October 17, 2013
 Lecture 3: Entity Analysis in Unstructured Data,
October 24, 2013
 Lecture 4: Analysis of Structured Data,
November 14, 2013
 Lecture 5: Perfect Power Law Graphs: Generation, Sampling, Construction, and Fitting,
October 31, 2013
 Lecture 6: Bio Sequence Cross Correlation,
November 29, 2013
 Lecture 7: Kronecker Graphs, Data Generation, and Performance,
December 12, 2013
 Database Demonstration,
December 5, 2013
 Perfect Power Law Graphs: Generation, Sampling, Construction and Fitting,
[Abstract]
[Presentation],
Jeremy Kepner,
SIAM Annual Meeting,
July 913, 2012, Minneapolis, Minnesota
 Massive Graphs: Big Compute meets Big Data,
Jeremy Kepner, David Bader & John Gilbert (coorganizers),
Minisymposium at SIAM Annual Meeting,
July 913, 2012, Minneapolis, Minnesota
 Spreadsheets, Big Tables, and the Algebra of Associatve Arrays,
Jeremy Kepner, MAA & AMS Joint Mathematics Meeting,
SIAM Minisymposium on Applied, Computational and Discrete Mathematics at National Laboratories and Federal Research Agencies (organizers: Vese & Nasheed),
Jan 47, 2012, Boston, MA
 A BiomedicalEngineering Approach to the Random and Systematic Errors of Diagnostic Prostate Biopsy,
H. Ahmed, M. Emberton, G. Kepner & J. Kepner,
Nature Reviews Urology 9, 227231 (April 2012)
 Graph Algorithms in the Language of Linear Algebra J. Kepner & J. Gilbert, SIAM Press, 2011.
 Contents [FREE]
 Preface [FREE]
 Graphs and Matrices J. Kepner
 Linear Algebraic Notation and Deﬁnitions E. Robinson, J. Kepner & J. Gilbert
 Connected Components and Minimum Paths C. M. Rader
 Some Graph Algorithms in an ArrayBased Language V. B. Shah, J. Gilbert & S. Reinhardt
 Fundamental Graph Algorithms J. T. Fineman & E. Robinson
 Complex Graph Algorithms E. Robinson
 Multilinear Algebra for Analyzing Data with Multiple Linkages D. Dunlavy, T. Kolda & W. P. Kegelmeyer
 Subgraph Detection J. Kepner
 Kronecker Graphs J. Leskovec
 The Kronecker Theory of Power Law Graphs J. Kepner
 Visualizing Large Kronecker Graphs H. Nguyen, J. Kepner & A. Edelman
 LargeScale Network Analysis D. A. Bader, C. Heitsch & K. Madduri
 Implementing Sparse Matrices for Graph Algorithms A. Buluc, J. Gilbert & V. B. Shah
 New Ideas in Sparse Matrix Matrix Multiplication A. Buluc & J. Gilbert
 Parallel Mapping of Sparse Computations E. Robinson, N. Bliss & S. Mohindra
 Fundamental Questions in the Analysis of Large Graphs J. Kepner, D. A. Bader, B. Bond, N. Bliss, C. Faloutsos, B. Hendrickson, J. Gilbert & E. Robinson
 Index [FREE]
 Transperineal prostate biopsy: analysis of a uniform core sampling pattern that yields data on tumor volume limits in negative biopsies,
G. Kepner & J. Kepner,
Theoretical Biology and Medical Modeling, 2010 Jun 17;7:23
 SubGraph Detection,
J. Kepner,
Graph Exploitation Symposium, April 1314, 2010, Nedham, MA
 Automatic registration of LIDAR and optical images of urban scenes,
A. Mastin, J. Kepner & J. Fisher III,
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009),
2025 June 2009, Miami, FL
 Graph Detection Theory for Power Law Graphs, J. Kepner, N. Bliss & E. Robinson,
SIAM Annual Meeting 2009,
Minisymposium on High Performance Computing on Massive RealWorld Graphs,
(organizers D. Bader, J. Gilbert & J. Kepner),
July 610, 2009, Denver, CO
 ,
J. Kepner,
IEEE Computer Society Conference on Computer Vision and Pattern Recognition,
(CVPR 2009), 2025 June 2009, Miami, FL
 Linear Algebraic Graph Algorithms for Back End Processing
[Abstract]
[PowerPoint]
[PDF],
J. Kepner, N. Bliss & E. Robinson,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 Theory of Multicore Algorithms
[Abstract]
[PowerPoint]
[PDF],
J. Kepner & N. Bliss,
HPEC Workshop, 2008, Sep 2325, Lexington, MA
 Analytic Theory of Power Law Graphs, J. Kepner,
SIAM Parallel Processing 2008,
Minisymposium on HPC on Large Graphs,
(organizers D. Bader, J. Gilbert & J. Kepner),
March 1214, 2008, Atlanta, GA
 Array Based Betweenness Centrality, E. Robinson & J. Kepner,
SIAM Parallel Processing 2008,
Minisymposium on HPC on Large Graphs,
(organizers D. Bader, J. Gilbert & J. Kepner),
March 1214, 2008, Atlanta, GA
 Cluster Detection in Databases:
the Adaptive Matched Filter Algorithm and Implementation,
J. Kepner and R. Kim,
2002 Data Mining and Knowledge Discovery, Vol 7, No 1
 The Alignment Effect of Brightest Cluster Galaxies in the SDSS,
with R. Kim et al, in
"Where's the Matter? Tracing Dark and Bright Matter with the New Generation of Large Scale Surveys",
June 2001, Treyer & Tresse Eds, Frontier Group.
 Detecting Clusters of Galaxies in the Sloan Digital Sky Survey.
I. Monte Carlo Comparison of Cluster Detection Algorithms,
with R. Kim et al, 2002 Astronomical Journal, Vol 123, pages 2036
 Exploiting VSIPL and OpenMP for Parallel Image Processing,
J. Kepner, November 1215, 2000, Boston, MA
Astronomical Data Analysis Software and Systems X (ADASS),
ASP Conference Proceedings, Vol. 238.
Edited by F. R. Harnden, Jr., Francis A. Primini, and Harry E. Payne.
San Francisco: Astronomical Society of the Pacific, ISSN: 10807926, 2001., p.209
 The Vector, Signal, and Image Processing Library (VSIPL): an
Open Standard for Astronomical Data Processing,
J. Kepner, J. Lebak, R. Janka and M. Richards,
2000 Bulletin of the American Astronomical Society, 195, #82.11
 Clusters of Galaxies in the Sloan Digital Sky Survey,
with R. Kim, M. Strauss, M. Postman, N. Bahcall, J. Gunn, R. Lupton,
W. Voges, M. Vogeley and the SDSS Collaboration,
2000 Bulletin of the American Astronomical Society, 195, #30.03
 Clusters of Galaxies in the Sloan Digital Sky Survey,
with R. Kim, M. Strauss, N. Bahcall, J. Gunn, R. Lupton, D. Schlegel
and the SDSS Collaboration,
1999 Bulletin of the American Astronomical Society, 194, #88.01
 Absorption Line Signatures of Gas in Mini Dark Matter Halos,
J. Kepner, T. Tripp, D. Spergel & T. Abel,
1999 Astronomical Journal 117, 2063
 An Automated Cluster Finder: the Adaptive Matched Filter,
J. Kepner, X. Fan, N. Bahcall, J. Gunn, R. Lupton & G. Xu,
1999 Astrophysical Journal 517, 78
 Simulating Galaxy Formation,
with Greg Bryan,
19th Texas Symposium on Relativistic Astrophysics and Cosmology, held in Paris, France, Dec. 1418,
1998. Eds.: J. Paul, T. Montmerle, and E. Aubourg (CEA Saclay).
 Absorption Line Signatures of Delayed Dwarfs,
J. Kepner, T. Abel, T. Tripp & D. Spergel,
1998 Bulletin of the American Astronomical Society, 191, #84.09
 Gas Behaviour in Galaxy Formation,
J. Kepner, Ph.D. Thesis Presentation, Princeton, NJ, April 27, 1998
 Insideout Galaxy Formation,
J. Kepner,
1999 Astrophysical Journal 520, 59
 The Delayed Formation of Dwarf Galaxies,
J. Kepner, A. Babul & D. Spergel,
1997 Astrophysical Journal, 487, 61
 A New Statistic for Redshift Surveys: the
Redshift Dispersion of Galaxies,
J. Kepner, F J Summers & M. Strauss, 1997 New Astronomy, 2, #2, 165
 Simulating Plasma Turbulence in Tokamaks,
J. Kepner, S. Parker & V. Decyk,
(May 1997) SIAM News, 30, #4, 1
 Omega from Sigma: Measuring the Cosmological Density with the
Redshift Dispersion of Galaxies,
J. Kepner, F J Summers & M. Strauss,
1995 Bulletin of the American Astronomical Society, 187, #86.04
 Finding Clusters in the SDSS:
Derivation of the Generalized Matched Filter,
J. Kepner & X. Fan, 1996, SDSS clusters archive #53
 Massively Parallel Computing of Turbulent Transport in Tokamaks,
J. Kepner, S. Parker & V. Decyk,
presented at the International Conference on Parallel Computing,
University of Minnesota Supercomputer Institute, October 34, 1996.
 Radially Global Gyrokinetic Simulation Studies of Transport Barriers,
S. E. Parker, H. E. Mynick, M. Artun, J. C. Cummings, V. Decyk, J. Kepner,
W. W. Lee, and W. M. Tang, 1996 Physics of Plasmas, 3, #5, 19591966
 Partially Embedded Young Stellar Aggregates,
with Strom, K.M., Strom, S.E., Allen, L., & Gordon, S.
1994 Revista Mexicana Astronomia and Astrofisica, 29, 30
 The Stellar Populations within the Rho Oph cloud cores,
with Strom, K.M., & Strom, S.E.
1994 Astrophysics & Space Science, 217, 223
 Hubble Space Telescope Images of the Subarcsecond Jet in DG Tau,
with Hartigan, P., Yang, C., & Strom, S.,
1993 Astrophysical Journal Letters, 415, L119
 Computation of IRAS Fluxes via a priori Astrometry,
with Horowitz, J., & Geman, D. 1993 in "Infrared Astronomy
with Arrays: The Next Generation," ed. Ian S. MacLean, Kluwer.
 Modeling Astrophysical Disks Using Nearest Neighbor Perturbations,
J.Kepner (advisor: Robert Chambers), Senior Honors Thesis for Astrophysics,
1991, Pomona College, Claremont, CA
 Comparison of Canonical and MicroCanonical Sampling Methods in a 2D Ising Model,
J.Kepner (advisor: Alexandre Chorin)
1990, Lawrence Berkeley Lab report
#LBL30056.
