Afshine Amidi

MIT Graduate

Education


Selected work


    VIP cheatsheets for Deep Learning
    Afshine Amidi, Shervine Amidi
    [pdf] [webpage]
    VIP cheatsheets for Machine Learning
    Afshine Amidi, Shervine Amidi
    [pdf] [webpage]
    EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation
    Afshine Amidi, Shervine Amidi, Dimitrios Vlachakis, Vasileios Megalooikonomou, Nikos Paragios, Evangelia Zacharaki
    [pdf] [code] [docs]

Publications


  1. Automatic single- and multi-label enzymatic function prediction by machine learning
    S. Amidi, A. Amidi, D. Vlachakis, N. Paragios, E. Zacharaki
    PeerJ, 2017
    [pdf] [code]
  2. A machine learning methodology for enzyme functional classification combining structural and protein sequence descriptors
    A. Amidi, S. Amidi, D. Vlachakis, N. Paragios, E. Zacharaki
    International Work-Conference on Bioinformatics and Biomedical Engineering, 2016
    [pdf] [code]