“ Theoretical study of Ion toroidal rotation in the presence of lower hybrid current drive in a tokamak" Jungpyo Lee, MIT Ph.D Thesis (2013)

“A positive-definite form of bounce-averaged quasilinear velocity diffusion for the parallel inhomogeneity in a tokamak” J. P. Lee, D. Smithe, J. C. Wright, P. T. Bonoli, Plasma Physics and Controlled Fusion 60, 025007 (2018)

“A quasilinear operator retaining magnetic drift effects in tokamak geometry” P. J. Catto, J. P. Lee, and A. K. Ram Journal of Plasma Physics 88, 905830611 (2017)

“An analytic scaling relation for the maximum tokamak elongation against n=0 MHD resistive wall modes” J. P. Lee , J. P. Freidberg , A. Cerfon , and M. Greenwald, Nuclear Fusion 57, 066051 (2017)

“Quasilinear diffusion coefficients in a finite Larmor radius expansion for ion cyclotron heated plasmas” J. P. Lee, J. C. Wright, N. Bertelli, E. Jaeger, E. Valeo, R. Harvey, and P. T. Bonoli, Physics of Plasmas 24, 052502 (2017)

“Experimentally testing the dependence of momentum transport on second derivatives using Gaussian process regression” M.A. Chilenski, M.J.Greenwald, A.E. Hubbard, J.W. Hughes, J.P. Lee, Y.M. Marzouk, J.E. Rice and A.E. White, Nuclear Fusion 57, 126013 (2017)

"HIS-TORIC: Extending core ICRF wave simulation to include realistic SOL plasmas"S. Shiraiwa, J. Wright, J. P. Lee, and P. Bonoli, Nuclear Fusion 57, 086048 (2017)

"Full wave simulations of ICRF heating regimes in toroidal plasma with non-Maxwellian distribution functions"N. Bertelli, E. Valeo, D. Green, M. Gorelenkova, C. Phillips, M.Podpera, J.P. Lee,J.Wright and E.Jaeger, Nuclear Fusion 57, 056036 (2017)

"Effect of the shafranov shift and the gradient of on beta on intrinsic momentum transport in up-down asymmetric tokamaks” J.Ball, F. I. Parra, J. P. Lee, and A. Cerfon, Plasma Physics and Controlled Fusion 58, 125015 (2016)

"Tokamak elongation – how much is too much? I Theory"J. P. Freidberg , A. Cerfon, and J. P. Lee, Journal of Plasma Physics (2015)

"Tokamak elongation – how much is too much? II Numerical Results" J. P. Lee , A. Cerfon , J. P. Freidberg , and M. Greenwald, Journal of Plasma Physics (2015) 2015 JPP Featured Article

"Turbulent momentum transport due to neoclassical flows"J. P. Lee, M. Barnes, F. I. Parra, E. Belli, and J. Candy, Plasma Physics and Controlled Fusion 57, 125006 (2015)

“The ECOM code: fast and accurate solver for toroidal axisymmetric MHD equilibria” J. P. Lee, A Cerfon, Computer Physics Communications 190, 72 (2015)

"The effect of diamagnetic flows on turbulent driven ion toroidal rotation" J. P. Lee, F. I. Parra, M. Barnes, E. Belli, and J. Candy, Physics of Plasmas 21, 056106 (2014) 2013 APS Invited Paper

"Time dependent evolution of RF-generated non-thermal particle distributions in fusion plasmas” J.C. Wright, A. Bader, L. A. Berry, P. T. Bonoli, R. W. Harvey, E. F. Jaeger, J.P. Lee, et. al., Plasma Physics and Controlled Fusion 56, 045007 (2014)

“Turbulent momentum pinch of diamangetic flows in a tokamak [selected paper for 2014 Nuclear Fusion Highlight]" J. P. Lee, F. I. Parra and M. Barnes, Nuclear Fusion 54, 022002 (2014) 2014 Nuclear Fusion Highlight Paper

“Versatile parallel block-tridiagonal solver for spectral codes" J. P. Lee and J. C. Wright, Computer Physics Communicationsi 185, 2598 (2014)

“Intrinsic Rotation Driven by Non-Maxwellian Equilibria in Tokamak Plasmas" M. Barnes, F. I. Parra, J. P. Lee, et. al. Physical Review Letters 111, 055005 (2013)

“Perpendicular momentum injection by lower hybrid wave in a tokamak" J. P. Lee, F. I. Parra, R. R. Parker and P. B. Bonoli, Plasma Physics and Controlled Fusion 54, 125005 (2012)

“Production of internal transport barrier via self-generated mean flows in Alcator C-Mod” C. L. Fiore, D.R. Ernst, Y.A. Podpaly, D. Mikkelsen, N.T.Howard, J.P. Lee et. al. Physics of Plasmas 19, 056113 (2012)

“Investigation of the validity of quasilinear theory for electron Landau damping in a tokamak using a broad-band wave effect" J. P. Lee, P. B. Bonoli, and J. C. Wright, Physics of Plasmas 18, 012503 (2011)

“Selective nanopatterning of protein via ion induced focusing and its application to metal-enhanced fluorescence" C. G. Woo, H. Shin, C. Jeong, K. Jun, J. P. Lee el. al. Small 7, 1790 (2011)

“Challenges in self-consistent full-wave simulations of Lower Hybrid waves" J. C. Wright, J. P. Lee, E. Valeo. P. B. Bonoli and et. al. IEEE Trasaction on Plasma Science 38, 2136 (2010)

“An analysis of millimeter-wave interferometry on Hall thruster plumes by finite difference time domain simulations” J. P. Lee and M. Cappelli, Journal of Physics D 41, 185205 (2008)

“Effect on plasma rotation of lower hybrid (LH) waves in Alcator C-Mod” J. P. Lee, M. Barnes, R. R. Parker, J. E. Rice, and et. al. Radio Frequency Power in Plasmas, AIP Conf. Proc. 1580, 398 (2013)

“Estimation of the ion toroidal rotation source due to momentum transfer from Lower Hybrid waves in Alcator C-Mod” J. P. Lee, J. C. Wright, P. B. Bonoli, R. R. Parker, P. J. Catto and et. al. Radio Frequency Power in Plasmas, AIP Conf. Proc. 1406, 459 (2011)

"Evaluation of plasma torque by RF waves in a combined Full-wave code and bounce-averaged Fokker-Plank code” J. P. Lee, J. C. Wright, R. Harvey, P. B. Bonoli, R. R. Parker and P. J. Catto, 53rd Annual meeting of the APS Division of Plasma Physics 56 T04.00013 (2011) ”Evaluation of plasma torque by RF waves in a combined Full-wave code and bounce-averaged Fokker-Plank code”

”Investigation of ion toroidal rotation induced by Lower hybrid waves in Alcator C-Mod using integrated numerical codes” J. P. Lee, J. C. Wright, P. B. Bonoli, R. R. Parker, P. J. Catto, Y. Podapaly, J. Rice and et. al. 52nd Annual meeting of the APS Division of Plasma Physics 55 TP9.00078 (2010)

”Investigation of velocity diffusion in the presence of a broadband lower hybrid wave spectrum” J. P. Lee, P. B. Bonoli and J. C. Wright, 51st Annual meeting of the APS Division of Plasma Physics 54 PP8.004 (2009)